2IC5 Signaling Protein date Sep 12, 2006
title Crystal Structure Of Human Rac3 Grown In The Presence Of Gpp
authors E.Ugochukwu, X.Yang, Y.Zao, J.Elkins, C.Gileadi, N.Burgess, S.Cole O.Gileadi, O.Fedorov, G.Bunkoczi, M.Sundstrom, C.Arrowsmith, J.W A.Edwards, F.Von Delft, D.Doyle, Structural Genomics Consortiu
compound source
Molecule: Ras-Related C3 Botulinum Toxin Substrate 3
Chain: A, B
Synonym: P21-Rac3
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rac3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl-21 (De3)R3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: P 21 21 21
R_factor 0.153 R_Free 0.200
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.755 81.583 84.381 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand BTB, CL, GDP, GNP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • synaptic transmission, GABAe...

    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (2ic5.pdb1.gz) 33 Kb
  • Biological Unit Coordinates (2ic5.pdb2.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 2IC5
  • CSU: Contacts of Structural Units for 2IC5
  • Likely Quarternary Molecular Structure file(s) for 2IC5
  • Structure Factors (431 Kb)
  • Retrieve 2IC5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IC5 from S2C, [Save to disk]
  • Re-refined 2ic5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2IC5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2IC5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IC5, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ic5_B] [2ic5] [2ic5_A]
  • SWISS-PROT database: [P60763]
  • Domain organization of [RAC3_HUMAN] by SWISSPFAM
  • Domain found in 2IC5: [RHO ] by SMART
    • Other resources with information on 2IC5
  • Community annotation for 2IC5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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