2ID1 Structural Genomics, Unknown Function date Sep 13, 2006
title X-Ray Crystal Structure Of Protein Cv0518 From Chromobacteri Violaceum, Northeast Structural Genomics Consortium Target
authors F.Forouhar, W.Zhou, J.Seetharaman, C.K.Ho, H.Janjua, K.Cunningham R.Xiao, J.Liu, M.Baran, T.B.Acton, B.Rost, G.T.Montelione, L.Tong J.F.Hunt, Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Hypothetical Protein
Chain: A, B
Engineered: Yes
 Organism_scientific: Chromobacterium Violaceum
Organism_taxid: 243365
Strain: Atcc 12472
Gene: Cv_0518
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21
symmetry Space Group: P 21 21 21
R_factor 0.228 R_Free 0.269
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.188 76.099 74.550 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand IOD, MSE enzyme
Gene CV
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (2id1.pdb1.gz) 19 Kb
  • Biological Unit Coordinates (2id1.pdb2.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 2ID1
  • CSU: Contacts of Structural Units for 2ID1
  • Likely Quarternary Molecular Structure file(s) for 2ID1
  • Structure Factors (137 Kb)
  • Retrieve 2ID1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ID1 from S2C, [Save to disk]
  • Re-refined 2id1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2ID1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2ID1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ID1, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2id1_A] [2id1] [2id1_B]
  • SWISS-PROT database: [Q7P0P8]
  • Domain organization of [Q7P0P8_CHRVO] by SWISSPFAM
    • Other resources with information on 2ID1
  • Community annotation for 2ID1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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