2IFO Virus date Aug 08, 1994
title Model-Building Studies Of Inovirus: Genetic Variations On A Theme
authors D.A.Marvin
compound source
Molecule: Inovirus
Chain: A
Engineered: Yes
 Organism_scientific: Filamentous Phage
Organism_taxid: 12420
Strain: Xf Major
symmetry Space Group: P 1
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Fiber Diffractionresolution NULL Å
Primary referenceModel-building studies of Inovirus: genetic variations on a geometric theme., Marvin DA, Int J Biol Macromol 1990 Apr;12(2):125-38. PMID:2078529
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (9 Kb) [Save to disk]
  • Biological Unit Coordinates (2ifo.pdb1.gz) 137 Kb
  • CSU: Contacts of Structural Units for 2IFO
  • Likely Quarternary Molecular Structure file(s) for 2IFO
  • Retrieve 2IFO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IFO from S2C, [Save to disk]
    • View 2IFO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2IFO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IFO, from MSDmotif at EBI
  • Genome occurence of 2IFO's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2ifo__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ifo_A] [2ifo]
  • SWISS-PROT database: [P03622]
  • Domain organization of [CAPSD_BPXF] by SWISSPFAM
    • Other resources with information on 2IFO
  • Community annotation for 2IFO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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