2IL2 Hydrolase date Oct 02, 2006
title Crystal Structure Of Human Renin Complexed With Inhibitor
authors I.Mochalkin
compound source
Molecule: Renin
Chain: A, B
Synonym: Angiotensinogenase
Ec: 3.4.23.15
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_cell: Ovary
symmetry Space Group: P 21 3
R_factor 0.206 R_Free 0.242
crystal
cell
length a length b length c angle alpha angle beta angle gamma
141.533 141.533 141.533 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.24 Å
ligand CIT, LIX BindingDB enzyme Hydrolase E.C.3.4.23.15 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceBinding thermodynamics of substituted diaminopyrimidine renin inhibitors., Sarver RW, Peevers J, Cody WL, Ciske FL, Dyer J, Emerson SD, Hagadorn JC, Holsworth DD, Jalaie M, Kaufman M, Mastronardi M, McConnell P, Powell NA, Quin J 3rd, Van Huis CA, Zhang E, Mochalkin I, Anal Biochem. 2006 Oct 30;. PMID:17113558
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk]
  • Biological Unit Coordinates (2il2.pdb1.gz) 323 Kb
  • LPC: Ligand-Protein Contacts for 2IL2
  • CSU: Contacts of Structural Units for 2IL2
  • Likely Quarternary Molecular Structure file(s) for 2IL2
  • Structure Factors (742 Kb)
  • Retrieve 2IL2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IL2 from S2C, [Save to disk]
  • Re-refined 2il2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2IL2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IL2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IL2, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1f2il2, region L:6132-6158 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2il2_B] [2il2] [2il2_A]
  • SWISS-PROT database: [P00797]
  • Domain organization of [RENI_HUMAN] by SWISSPFAM
  • Other resources with information on 2IL2
  • Community annotation for 2IL2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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