2IPJ Crystal structure of h3alpha-hydroxysteroid dehydrogenase type 3 mutant Y24A in complex with NADP+ and epi-testosterone date
authors Faucher, F., Cantin, L., Jesus-Tran, K.Pereira.de., Luu-the, V., Labrie, F., Breton, R.
compound source
symmetry
R_factor
R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand BME, EDO, FFA, NAP, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMouse 17alpha-hydroxysteroid dehydrogenase (AKR1C21) binds steroids differently from other aldo-keto reductases: identification and characterization of amino acid residues critical for substrate binding., Faucher F, Cantin L, Pereira de Jesus-Tran K, Lemieux M, Luu-The V, Labrie F, Breton R, J Mol Biol. 2007 Jun 1;369(2):525-40. Epub 2007 Mar 27. PMID:17442338
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]
  • Biological Unit Coordinates (2ipj.pdb1.gz) 123 Kb
  • Biological Unit Coordinates (2ipj.pdb2.gz) 63 Kb
  • Biological Unit Coordinates (2ipj.pdb3.gz) 63 Kb
  • LPC: Ligand-Protein Contacts for 2IPJ
  • CSU: Contacts of Structural Units for 2IPJ
  • Likely Quarternary Molecular Structure file(s) for 2IPJ
  • Structure Factors (630 Kb)
  • Retrieve 2IPJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IPJ from S2C, [Save to disk]
  • Re-refined 2ipj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2IPJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IPJ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2IPJ, from MSDmotif at EBI
  • Fold representative 2ipj from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ipj_B] [2ipj_A] [2ipj]
  • SWISS-PROT database: [P52895]
  • Domain organization of [AK1C2_HUMAN] by SWISSPFAM
  • Other resources with information on 2IPJ
  • Community annotation for 2IPJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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