2IW0 Hydrolase date Jun 23, 2006
title Structure Of The Chitin Deacetylase From The Fungal Pathogen Colletotrichum Lindemuthianum
authors D.E.Blair, O.Hekmat, A.W.Schuttelkopf, B.Shrestha, K.Tokuyasu, S.G.Withers, D.M.F.Van Aalten
compound source
Molecule: Chitin Deacetylase
Chain: A
Ec: 3.5.1.41
Engineered: Yes
Organism_scientific: Colletotrichum Lindemuthianum
Organism_common: Glomerella Lindemuthiana
Organism_taxid: 290576
Strain: Ups9
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
Expression_system_strain: Gs115
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ppic9k
symmetry Space Group: P 21 21 2
R_factor 0.172 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.275 55.022 60.057 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.81 Å
ligand ACT, CL, PO4, ZN enzyme Hydrolase E.C.3.5.1.41 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure and mechanism of chitin deacetylase from the fungal pathogen Colletotrichum lindemuthianum., Blair DE, Hekmat O, Schuttelkopf AW, Shrestha B, Tokuyasu K, Withers SG, van Aalten DM, Biochemistry. 2006 Aug 8;45(31):9416-26. PMID:16878976
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (2iw0.pdb1.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 2IW0
  • CSU: Contacts of Structural Units for 2IW0
  • Likely Quarternary Molecular Structure file(s) for 2IW0
  • Structure Factors (359 Kb)
  • Retrieve 2IW0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IW0 from S2C, [Save to disk]
  • Re-refined 2iw0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2IW0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IW0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IW0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2iw0_A] [2iw0]
  • SWISS-PROT database: [Q6DWK3]
  • Domain organization of [Q6DWK3_COLLN] by SWISSPFAM
  • Other resources with information on 2IW0
  • Community annotation for 2IW0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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