2IX9 Hydrolase date Jul 07, 2006
title Respective Role Of Protein Folding And Glycosylation In The Stability Of Recombinant Feruloyl Esterase A
authors G.Sulzenbacher, I.Benoit
compound source
Molecule: Feruloyl Esterase A
Chain: A, B
Fragment: Catalytic Domain, Residues 22-281
Synonym: Feruloyl Esterase Type A, Fae-III, Cinnamoyl Ester
Ec: 3.1.1.73
Engineered: Yes
Organism_scientific: Aspergillus Niger
Organism_taxid: 5061
Strain: D15pyrg
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pdestoi17
symmetry Space Group: C 1 2 1
R_factor 0.153 R_Free 0.190
crystal
cell
length a length b length c angle alpha angle beta angle gamma
158.825 51.556 72.553 90.00 109.27 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand CXS, EDO, SO4 enzyme Hydrolase E.C.3.1.1.73 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceRespective importance of protein folding and glycosylation in the thermal stability of recombinant feruloyl esterase A., Benoit I, Asther M, Sulzenbacher G, Record E, Marmuse L, Parsiegla G, Gimbert I, Asther M, Bignon C, FEBS Lett. 2006 Oct 30;580(25):5815-21. Epub 2006 Sep 27. PMID:17027758
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (2ix9.pdb1.gz) 48 Kb
  • Biological Unit Coordinates (2ix9.pdb2.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 2IX9
  • CSU: Contacts of Structural Units for 2IX9
  • Likely Quarternary Molecular Structure file(s) for 2IX9
  • Structure Factors (841 Kb)
  • Retrieve 2IX9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IX9 from S2C, [Save to disk]
  • Re-refined 2ix9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2IX9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IX9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IX9, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ix9_B] [2ix9] [2ix9_A]
  • SWISS-PROT database: [O42807]
  • Domain organization of [FAEA_ASPNG] by SWISSPFAM
  • Other resources with information on 2IX9
  • Community annotation for 2IX9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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