2J2C Crystal structure of Human Cytosolic 5'-Nucleotidase II (NT5C2, cN-II) date
authors Wallden, K., Stenmark, P., Arrowsmith, C., Berglund, H., Busam, R., Collins, R., Edwards, A., Ehn, M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Hallberg, B.M., Schiavone, L.Holmberg., Hogbom, M., Karlberg, T., Kotenyova, T., Loppnau, P., Magnusdottir, A., Nilsson-Ehle, P., Nyman, T., Ogg, D., Persson, C., Sagemark, J., Sundstrom, M., Uppenberg, J., Thorsell, A.G., Berg, S.Van.Den., Weigelt, J., Welin, M., Nordlund, P.
compound source
symmetry
R_factor
R_Free 0.184
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
ligand GOL, MG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • 5'-nucleotidase activity


  • Primary referenceCrystal structure of human cytosolic 5'-nucleotidase II: insights into allosteric regulation and substrate recognition., Wallden K, Stenmark P, Nyman T, Flodin S, Graslund S, Loppnau P, Bianchi V, Nordlund P, J Biol Chem. 2007 Jun 15;282(24):17828-36. Epub 2007 Apr 3. PMID:17405878
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (2j2c.pdb1.gz) 173 Kb
  • LPC: Ligand-Protein Contacts for 2J2C
  • CSU: Contacts of Structural Units for 2J2C
  • Likely Quarternary Molecular Structure file(s) for 2J2C
  • Structure Factors (555 Kb)
  • Retrieve 2J2C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2J2C from S2C, [Save to disk]
  • Re-refined 2j2c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2J2C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2J2C
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2J2C, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2j2c_A] [2j2c]
  • SWISS-PROT database: [P49902]
  • Domain organization of [5NTC_HUMAN] by SWISSPFAM
  • Other resources with information on 2J2C
  • Community annotation for 2J2C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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