2JAF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BOG, CL, PLM, RET	enzyme
Gene Ontology	Chain Function Process Component A ion channel activity
Primary reference	The crystal structure of the L1 intermediate of halorhodopsin at 1.9 angstroms resolution., Gmelin W, Zeth K, Efremov R, Heberle J, Tittor J, Oesterhelt D, Photochem Photobiol. 2007 Mar-Apr;83(2):369-77. PMID:17117890

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk] Biological Unit Coordinates (2jaf.pdb1.gz) 115 Kb LPC: Ligand-Protein Contacts for 2JAF CSU: Contacts of Structural Units for 2JAF Likely Quarternary Molecular Structure file(s) for 2JAF Retrieve 2JAF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2JAF from S2C, [Save to disk]

View 2JAF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2jaf] [2jaf_A] SWISS-PROT database: [P16102] Belongs to the ion-translocating microbial rhodopsin (mr) family according to TCDB. Domain found in 2JAF: [Bac_rhodopsin ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---