2JAG date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BOG, CL, PLM, RET enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • ion channel activity


  • Primary referenceThe crystal structure of the L1 intermediate of halorhodopsin at 1.9 angstroms resolution., Gmelin W, Zeth K, Efremov R, Heberle J, Tittor J, Oesterhelt D, Photochem Photobiol. 2007 Mar-Apr;83(2):369-77. PMID:17117890
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (2jag.pdb1.gz) 119 Kb
  • LPC: Ligand-Protein Contacts for 2JAG
  • CSU: Contacts of Structural Units for 2JAG
  • Likely Quarternary Molecular Structure file(s) for 2JAG
  • Retrieve 2JAG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JAG from S2C, [Save to disk]
  • View 2JAG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jag] [2jag_A]
  • SWISS-PROT database: [P16102]
  • Belongs to the ion-translocating microbial rhodopsin (mr) family according to TCDB.
  • Domain found in 2JAG: [Bac_rhodopsin ] by SMART

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