2JGD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	AMP	enzyme
note	2JGD (Molecule of the Month:pdb154)
Gene Ontology	Chain Function Process Component B, A
Primary reference	Crystal structure of the E1 component of the Escherichia coli 2-oxoglutarate dehydrogenase multienzyme complex., Frank RA, Price AJ, Northrop FD, Perham RN, Luisi BF, J Mol Biol. 2007 May 4;368(3):639-51. Epub 2007 Feb 7. PMID:17367808

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (274 Kb) [Save to disk] Biological Unit Coordinates (2jgd.pdb1.gz) 266 Kb LPC: Ligand-Protein Contacts for 2JGD CSU: Contacts of Structural Units for 2JGD Likely Quarternary Molecular Structure file(s) for 2JGD Structure Factors (1147 Kb) Retrieve 2JGD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2JGD from S2C, [Save to disk] Re-refined 2jgd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2JGD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2jgd] [2jgd_A] [2jgd_B] SWISS-PROT database: [P0AFG3] Domain found in 2JGD: [Transket_pyr ] by SMART

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