2JHX Inhibitor date Feb 23, 2007
title Crystal Structure Of Rhogdi E155h, E157h Mutant
authors D.R.Cooper, M.Zawadzki, Z.S.Derewenda
compound source
Molecule: Rho Gdp-Dissociation Inhibitor 1
Chain: A, B
Fragment: Isoprenyl-Binding Domain, Residues 66-201
Synonym: Rho Gdi 1, Rho-Gdi Alpha
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pgst-Parallel1
symmetry Space Group: H 3 2
R_factor 0.194 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
130.124 130.124 162.885 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.60 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceProtein crystallization by surface entropy reduction: optimization of the SER strategy., Cooper DR, Boczek T, Grelewska K, Pinkowska M, Sikorska M, Zawadzki M, Derewenda Z, Acta Crystallogr D Biol Crystallogr. 2007 May;63(Pt 5):636-45. Epub 2007, Apr 21. PMID:17452789
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (2jhx.pdb1.gz) 27 Kb
  • Biological Unit Coordinates (2jhx.pdb2.gz) 27 Kb
  • CSU: Contacts of Structural Units for 2JHX
  • Likely Quarternary Molecular Structure file(s) for 2JHX
  • Retrieve 2JHX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JHX from S2C, [Save to disk]
  • View 2JHX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JHX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JHX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jhx] [2jhx_B] [2jhx_A]
  • SWISS-PROT database: [P52565]
  • Domain organization of [GDIR1_HUMAN] by SWISSPFAM
  • Other resources with information on 2JHX
  • Community annotation for 2JHX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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