2JPQ Structural Genomics date May 21, 2007
title Solution Nmr Structure Of Homodimer Vp2129 From Vibrio Parahaemolyticus. Northeast Structural Genomics Consortium Vpr61.
authors T.A.Ramelot, J.R.Cort, H.Wang, C.Nwosu, K.Cunningham, L.Owens, L. R.Xiao, J.Liu, M.C.Baran, G.V.T.Swapna, T.B.Acton, B.Rost, G.T.Mo M.A.Kennedy, Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Upf0352 Protein Vp2129
Chain: A, B
Engineered: Yes
 Organism_scientific: Vibrio Parahaemolyticus
Organism_taxid: 670
Gene: Vp2129
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 De3 Pmgk
Expression_system_vector_type: Vector
Expression_system_vector: Pet21
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (856 Kb) [Save to disk]
  • Biological Unit Coordinates (2jpq.pdb1.gz) 43 Kb
  • CSU: Contacts of Structural Units for 2JPQ
  • Original NMR restraints for 2JPQ from PDB
  • Retrieve 2JPQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JPQ from S2C, [Save to disk]
    • View 2JPQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JPQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JPQ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jpq_B] [2jpq_A] [2jpq]
  • SWISS-PROT database: [Q87MV2]
  • Domain organization of [Y2129_VIBPA] by SWISSPFAM
    • Other resources with information on 2JPQ
  • Community annotation for 2JPQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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