2JUL Dna Binding Protein date Aug 30, 2007
title Nmr Structure Of Dream
authors J.Ames
compound source
Molecule: Calsenilin
Chain: A
Synonym: Kv Channel-Interacting Protein 3, Kchip3, A-Type P Channel Modulatory Protein 3, Dre-Antagonist Modulator, Dre
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Kcnip3, Csen, Dream, Kchip3
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet23a
methodSolution NMR
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR structure of DREAM: Implications for Ca(2+)-dependent DNA binding and protein dimerization., Lusin JD, Vanarotti M, Li C, Valiveti A, Ames JB, Biochemistry. 2008 Feb 26;47(8):2252-64. Epub 2008 Jan 18. PMID:18201103
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (739 Kb) [Save to disk]
  • Biological Unit Coordinates (2jul.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 2JUL
  • CSU: Contacts of Structural Units for 2JUL
  • Original NMR restraints for 2JUL from PDB
  • Retrieve 2JUL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JUL from S2C, [Save to disk]
    • View 2JUL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JUL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JUL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jul] [2jul_A]
  • SWISS-PROT database: [Q9QXT8]
  • Domain organization of [CSEN_MOUSE] by SWISSPFAM
  • Domain found in 2JUL: [EFh ] by SMART
    • Other resources with information on 2JUL
  • Community annotation for 2JUL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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