2K2R Cell Adhesion date Apr 10, 2008
title The Nmr Structure Of Alpha-Parvin Ch2paxillin Ld1 Complex
authors X.Wang, K.Fukuda, I.Byeon, A.Velyvis, C.Wu, A.Gronenborn, J.Qin
compound source
Molecule: Alpha-Parvin
Chain: A
Synonym: Calponin-Like Integrin-Linked Kinase-Binding Prote Ilkbp, Actopaxin;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Gene: Parva
Expression_system: Escherichia Coli
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet3a

Molecule: Paxillin
Chain: B
Engineered: Yes
Synthetic: Yes
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe Structure of {alpha}-Parvin CH2-Paxillin LD1 Complex Reveals a Novel Modular Recognition for Focal Adhesion Assembly., Wang X, Fukuda K, Byeon IJ, Velyvis A, Wu C, Gronenborn A, Qin J, J Biol Chem. 2008 Jul 25;283(30):21113-21119. Epub 2008 May 28. PMID:18508764
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (836 Kb) [Save to disk]
  • Biological Unit Coordinates (2k2r.pdb1.gz) 41 Kb
  • CSU: Contacts of Structural Units for 2K2R
  • Original NMR restraints for 2K2R from PDB
  • Retrieve 2K2R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K2R from S2C, [Save to disk]
    • View 2K2R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2K2R
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2K2R, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k2r_B] [2k2r_A] [2k2r]
  • SWISS-PROT database: [Q9NVD7]
  • Domain organization of [PARVA_HUMAN] by SWISSPFAM
  • Domain found in 2K2R: [CH ] by SMART
    • Other resources with information on 2K2R
  • Community annotation for 2K2R at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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