2K61 Metal Binding Protein date Jul 02, 2008
title Solution Structure Of Cam Complexed To Dapk Peptide
authors I.Bertini, C.Luchinat, G.Parigi, J.Yuan
compound source
Molecule: Calmodulin
Chain: A
Synonym: Cam
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Man
Organism_taxid: 9606
Gene: Calm1, Calm, Cam, Cam1, Calm2, Cam2, Camb, Calm3, Cal Cam3, Camc, Camiii;
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet16b-Cam
methodSolution NMR
ligand CA, TB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAccurate solution structures of proteins from X-ray data and a minimal set of NMR data: calmodulin-peptide complexes as examples., Bertini I, Kursula P, Luchinat C, Parigi G, Vahokoski J, Wilmanns M, Yuan J, J Am Chem Soc. 2009 Apr 15;131(14):5134-44. PMID:19317469
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (2k61.pdb1.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 2K61
  • CSU: Contacts of Structural Units for 2K61
  • Original NMR restraints for 2K61 from PDB
  • Retrieve 2K61 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K61 from S2C, [Save to disk]
    • View 2K61 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2K61
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2K61, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k61_A] [2k61]
  • SWISS-PROT database: [P62158]
  • Belongs to the calmodulin calcium binding protein (calmodulin) family according to TCDB.
  • Domain organization of [CALM_HUMAN] by SWISSPFAM
  • Domain found in 2K61: [EFh ] by SMART
    • Other resources with information on 2K61
  • Community annotation for 2K61 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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