2KDH Structural Protein date Jan 09, 2009
title The Solution Structure Of Human Cardiac Troponin C In Comple Green Tea Polyphenol; (-)-Epigallocatechin-3-Gallate
authors I.M.Robertson, M.X.Li, B.D.Sykes
compound source
Molecule: Troponin C, Slow Skeletal And Cardiac Muscles
Chain: A
Synonym: Tn-C
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tnnc1, Tnnc
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet3c
methodSolution NMR
ligand CA, KDH enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of human cardiac troponin C in complex with the green tea polyphenol, (-)-epigallocatechin 3-gallate., Robertson IM, Li MX, Sykes BD, J Biol Chem. 2009 Aug 21;284(34):23012-23. Epub 2009 Jun 20. PMID:19542563
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (676 Kb) [Save to disk]
  • Biological Unit Coordinates (2kdh.pdb1.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 2KDH
  • CSU: Contacts of Structural Units for 2KDH
  • Original NMR restraints for 2KDH from PDB
  • Retrieve 2KDH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KDH from S2C, [Save to disk]
  • View 2KDH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KDH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KDH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kdh_A] [2kdh]
  • SWISS-PROT database: [P63316]
  • Domain organization of [TNNC1_HUMAN] by SWISSPFAM
  • Domain found in 2KDH: [EFh ] by SMART
  • Other resources with information on 2KDH
  • Community annotation for 2KDH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science