2KE3 Hydrolase date Jan 22, 2009
title Pc13 Dcsg Sorting Domain In Chaps
authors J.D.Dikeakos, P.Di Lello, M.J.Lacombe, R.Ghirlando, P.Legault, T.L.Reudelhuber, J.G.Omichinski
compound source
Molecule: Neuroendocrine Convertase 1
Chain: A
Fragment: Unp Residues 711-753
Synonym: Nec 1, Pc1, Prohormone Convertase 1, Proprotein Co 1, Pc3, Furin Homolog, Propeptide-Processing Protease;
Ec: 3.4.21.93
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Pcsk1, Att-1, Nec-1, Nec1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex 2t
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.4.21.93 BRENDA
Primary referenceFunctional and structural characterization of a dense core secretory granule sorting domain from the PC1/3 protease., Dikeakos JD, Di Lello P, Lacombe MJ, Ghirlando R, Legault P, Reudelhuber TL, Omichinski JG, Proc Natl Acad Sci U S A. 2009 May 5;106(18):7408-13. Epub 2009 Apr 17. PMID:19376969
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (239 Kb) [Save to disk]
  • Biological Unit Coordinates (2ke3.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 2KE3
  • Original NMR restraints for 2KE3 from PDB
  • Retrieve 2KE3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KE3 from S2C, [Save to disk]
  • View 2KE3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KE3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KE3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ke3_A] [2ke3]
  • SWISS-PROT database: [P63239]
  • Domain organization of [NEC1_MOUSE] by SWISSPFAM
  • Other resources with information on 2KE3
  • Community annotation for 2KE3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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