2KFG	Protein Binding	date	Feb 20, 2009
title	Structure Of The C-Terminal Domain Of Ehd1 In Complex With Fnyestdpftak
authors	F.Kieken, M.Jovic, M.Tonelli, N.Naslavsky, S.Caplan, P.Sorgen
compound		source
Molecule: Eh Domain-Containing Protein 1 Chain: A Fragment: Eh-Domain, Residues 435-534 Synonym: Testilin, Hpast1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ehd1, Past, Past1, Cdabp0131 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector: Pgex6p-2
Molecule: Rab11-Fip2 Dpf Peptide Fnyestdpftak Chain: B Engineered: Yes		Synthetic: Yes Other_details: The Peptide Has Been Synthesized Chemically
method	Solution NMR
ligand	CA	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structural insight into the interaction of proteins containing NPF, DPF, and GPF motifs with the C-terminal EH-domain of EHD1., Kieken F, Jovic M, Tonelli M, Naslavsky N, Caplan S, Sorgen PL, Protein Sci. 2009 Dec;18(12):2471-9. PMID:19798736

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (350 Kb) [Save to disk] Biological Unit Coordinates (2kfg.pdb1.gz) 35 Kb LPC: Ligand-Protein Contacts for 2KFG CSU: Contacts of Structural Units for 2KFG Original NMR restraints for 2KFG from PDB Retrieve 2KFG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2KFG from S2C, [Save to disk]

View 2KFG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2KFG

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2KFG, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2kfg_B] [2kfg_A] [2kfg] SWISS-PROT database: [Q9H4M9] Domain organization of [EHD1_HUMAN] by SWISSPFAM Domain found in 2KFG: [EH ] by SMART

Other resources with information on 2KFG

Community annotation for 2KFG at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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