2KHQ Dna Binding Protein date Apr 10, 2009
title Solution Nmr Structure Of A Phage Integrase Ssp1947 Fragment From Staphylococcus Saprophyticus, Northeast Structural Gen Consortium Target Syr103b
authors A.Eletsky, J.L.Mills, J.Hua, R.L.Belote, C.Ciccosanti, M.Jiang, R. B.Rost, T.B.Acton, R.Xiao, G.V.T.Swapna, J.K.Everett, G.T.Montel T.Szyperski, Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Integrase
Chain: A
Fragment: Residues 59-159
Engineered: Yes
 Organism_scientific: Staphylococcus Saprophyticus Subsp. Saprophyticus Atcc 15305;
Organism_taxid: 342451
Strain: Atcc 15305 Dsm 20229
Gene: Ssp1947
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+ Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet 21-23c
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (714 Kb) [Save to disk]
  • Biological Unit Coordinates (2khq.pdb1.gz) 36 Kb
  • CSU: Contacts of Structural Units for 2KHQ
  • Original NMR restraints for 2KHQ from PDB
  • Retrieve 2KHQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KHQ from S2C, [Save to disk]
    • View 2KHQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KHQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KHQ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2khq_A] [2khq]
  • SWISS-PROT database: [Q49VW8]
  • Domain organization of [Q49VW8_STAS1] by SWISSPFAM
    • Other resources with information on 2KHQ
  • Community annotation for 2KHQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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