2KLM Ribosomal Protein date Jul 06, 2009
title Solution Structure Of L11 With Saxs And Rdc
authors J.Wang, X.Zuo, P.Yu, C.D.Schwieters, Y.Wang
compound source
Molecule: 50s Ribosomal Protein L11
Chain: A
Engineered: Yes
Organism_scientific: Thermus Thermophilus
Organism_taxid: 274
Gene: Rplk, Rpl11
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet11
methodSolution Scattering; Solution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDetermination of multicomponent protein structures in solution using global orientation and shape restraints., Wang J, Zuo X, Yu P, Byeon IJ, Jung J, Wang X, Dyba M, Seifert S, Schwieters CD, Qin J, Gronenborn AM, Wang YX, J Am Chem Soc. 2009 Aug 5;131(30):10507-15. PMID:19722627
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (381 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2KLM
  • Original NMR restraints for 2KLM from PDB
  • Retrieve 2KLM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KLM from S2C, [Save to disk]
  • View 2KLM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KLM
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2KLM, from MSDmotif at EBI
  • Fold representative 2klm from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2klm_A] [2klm]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2KLM: [RL11 ] by SMART
  • Other resources with information on 2KLM
  • Community annotation for 2KLM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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