2KOD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
note	2KOD (Molecule of the Month:pdb163)
Gene Ontology	Chain Function Process Component B, A
Primary reference	Structural convergence between Cryo-EM and NMR reveals intersubunit interactions critical for HIV-1 capsid function., Byeon IJ, Meng X, Jung J, Zhao G, Yang R, Ahn J, Shi J, Concel J, Aiken C, Zhang P, Gronenborn AM, Cell. 2009 Nov 13;139(4):780-90. PMID:19914170

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1348 Kb) [Save to disk] Biological Unit Coordinates (2kod.pdb1.gz) 46 Kb CSU: Contacts of Structural Units for 2KOD Original NMR restraints for 2KOD from PDB Retrieve 2KOD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2KOD from S2C, [Save to disk]

View 2KOD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2kod] [2kod_A] [2kod_B] SWISS-PROT database: [P04585]

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