2KS1 Transferase date Dec 24, 2009
title Heterodimeric Association Of Transmembrane Domains Of Erbb1 Receptors Enabling Kinase Activation
authors K.S.Mineev, E.V.Bocharov, Y.E.Pustovalova, O.V.Bocharova, V.V.Ch A.S.Arseniev
compound source
Molecule: Receptor Tyrosine-Protein Kinase Erbb-2
Chain: A
Fragment: Erbb2tm Domain, Unp Residues 641-684
Synonym: P185erbb2, C-Erbb-2, Neu Proto-Oncogene, Tyrosine Type Cell Surface Receptor Her2, Mln 19;
Ec: 2.7.10.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Erbb2, Her2, Neu, Ngl
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Epidermal Growth Factor Receptor
Chain: B
Fragment: Erbb1tm Domain, Unp Residues 634-677
Synonym: Receptor Tyrosine-Protein Kinase Erbb-1
Ec: 2.7.10.1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Egfr, Erbb1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.10.1 BRENDA
note 2KS1 is a representative structure
Primary referenceSpatial Structure of the Transmembrane Domain Heterodimer of ErbB1 and ErbB2 Receptor Tyrosine Kinases., Mineev KS, Bocharov EV, Pustovalova YE, Bocharova OV, Chupin VV, Arseniev AS, J Mol Biol. 2010 May 13. PMID:20471394
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (289 Kb) [Save to disk]
  • Biological Unit Coordinates (2ks1.pdb1.gz) 25 Kb
  • CSU: Contacts of Structural Units for 2KS1
  • Original NMR restraints for 2KS1 from PDB
  • Retrieve 2KS1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KS1 from S2C, [Save to disk]
  • View 2KS1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KS1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KS1, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ks1] [2ks1_A] [2ks1_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2KS1
  • Community annotation for 2KS1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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