2L8J	GABARAPL-1 NBR1-LIR complex structure	date
authors	Rogov, V.V., Rozenknop, A., Rogova, N.Y., Loehr, F., Guentert, P., Dikic, I., Doetsch, V.
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component A
Primary reference	Characterization of the Interaction of GABARAPL-1 with the LIR Motif of NBR1., Rozenknop A, Rogov VV, Rogova NY, Lohr F, Guntert P, Dikic I, Dotsch V, J Mol Biol. 2011 Jul 15;410(3):477-87. Epub 2011 May 18. PMID:21620860

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (729 Kb) [Save to disk] Biological Unit Coordinates (2l8j.pdb1.gz) 37 Kb CSU: Contacts of Structural Units for 2L8J Original NMR restraints for 2L8J from PDB Retrieve 2L8J in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2L8J from S2C, [Save to disk]

View 2L8J in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2L8J

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2L8J, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2l8j_B] [2l8j_A] [2l8j] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 2L8J

Community annotation for 2L8J at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---