2LG4 Antimicrobial Protein date Jul 20, 2011
title 3d Solution Structure Of Antimicrobial Peptide Aurelin
authors Z.Shenkarev, D.Altukhov
compound source
Molecule: Aurelin
Chain: A
Engineered: Yes
 Organism_scientific: Aurelia Aurita
Organism_common: Moon Jellyfish
Organism_taxid: 6145
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pgem-T
methodSolution NMR
Primary referenceRecombinant expression and solution structure of antimicrobial peptide aurelin from jellyfish Aurelia aurita., Shenkarev ZO, Panteleev PV, Balandin SV, Gizatullina AK, Altukhov DA, Finkina EI, Kokryakov VN, Arseniev AS, Ovchinnikova TV, Biochem Biophys Res Commun. 2012 Dec 7;429(1-2):63-9. doi:, 10.1016/j.bbrc.2012.10.092. Epub 2012 Nov 5. PMID:23137541
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (193 Kb) [Save to disk]
  • Biological Unit Coordinates (2lg4.pdb1.gz) 10 Kb
  • CSU: Contacts of Structural Units for 2LG4
  • Original NMR restraints for 2LG4 from PDB
  • Retrieve 2LG4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LG4 from S2C, [Save to disk]
    • View 2LG4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2LG4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LG4, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lg4_A] [2lg4]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LG4: [ShKT ] by SMART
    • Other resources with information on 2LG4
  • Community annotation for 2LG4 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science