2LVH Solution structure of the zinc finger AFV1p06 protein from the hyperthermophilic archaeal virus AFV1 date
authors Guilliere, F., Sezonov, G., Prangishvili, D., Delepierre, M., Guijarro, J.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of an archaeal DNA binding protein with an eukaryotic zinc finger fold., Guilliere F, Danioux C, Jaubert C, Desnoues N, Delepierre M, Prangishvili D, Sezonov G, Guijarro JI, PLoS One. 2013;8(1):e52908. doi: 10.1371/journal.pone.0052908. Epub 2013 Jan 9. PMID:23326363
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (2lvh.pdb1.gz) 13 Kb
  • LPC: Ligand-Protein Contacts for 2LVH
  • CSU: Contacts of Structural Units for 2LVH
  • Original NMR restraints for 2LVH from PDB
  • Retrieve 2LVH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LVH from S2C, [Save to disk]
    • View 2LVH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2LVH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LVH, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lvh] [2lvh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LVH: [ZnF_C2H2 ] by SMART
    • Other resources with information on 2LVH
  • Community annotation for 2LVH at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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