2M0T Structural characterization of the extended PDZ1 domain from NHERF1 date
authors Bhattacharya, S., Ju, J.H., Cowburn, D., Bu, Z.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceLigand-Induced Dynamic Changes in Extended PDZ Domains from NHERF1., Bhattacharya S, Ju JH, Orlova N, Khajeh JA, Cowburn D, Bu Z, J Mol Biol. 2013 Apr 10. pii: S0022-2836(13)00209-X. doi:, 10.1016/j.jmb.2013.04.001. PMID:23583913
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (589 Kb) [Save to disk]
  • Biological Unit Coordinates (2m0t.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 2M0T
  • Original NMR restraints for 2M0T from PDB
  • Retrieve 2M0T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M0T from S2C, [Save to disk]
  • View 2M0T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M0T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M0T, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m0t_A] [2m0t]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2M0T: [PDZ ] by SMART
  • Other resources with information on 2M0T
  • Community annotation for 2M0T at PDBWiki (http://pdbwiki.org)

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