2M27	Dna	date	Dec 14, 2012
title	Major G-Quadruplex Structure Formed In Human Vegf Promoter, Monomeric Parallel-Stranded Quadruplex
authors	P.Agrawal, E.Hatzakis, K.Guo, M.Carver, D.Yang
compound		source
Molecule: Dna_(5'- D(Cpgpgpgpgpcpgpgpgpcpcptptpgpgpgpcpgpgp 3')_; Chain: A Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
method	Solution NMR
Primary reference	Solution structure of the major G-quadruplex formed in the human VEGF promoter in K+: insights into loop interactions of the parallel G-quadruplexes., Agrawal P, Hatzakis E, Guo K, Carver M, Yang D, Nucleic Acids Res. 2013 Sep 4. PMID:24005038

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (117 Kb) [Save to disk] Biological Unit Coordinates (2m27.pdb1.gz) 12 Kb CSU: Contacts of Structural Units for 2M27 Original NMR restraints for 2M27 from PDB Retrieve 2M27 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2M27 from S2C, [Save to disk]

View 2M27 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2M27

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2M27, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2m27] [2m27_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 2M27

Community annotation for 2M27 at PDBWiki (http://pdbwiki.org)

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