2M2Y Antimicrobial Protein date Jan 03, 2013
title Solution Structure Of The Antimicrobial Peptide Btd-2[3,4]
authors A.C.Conibear, K.Rosengren, N.L.Daly, S.Troiera Henriques, D.J.Cr
compound source
Molecule: Btd-2[3,4]
Chain: A
Engineered: Yes
 Synthetic: Yes
Other_details: Solid Phase Peptide Synthesis
methodSolution NMR
Primary referenceThe cyclic cystine ladder in theta-defensins is important for structure and stability, but not antibacterial activity., Conibear AC, Rosengren KJ, Daly NL, Henriques ST, Craik DJ, J Biol Chem. 2013 Feb 21. PMID:23430740
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (2m2y.pdb1.gz) 5 Kb
  • CSU: Contacts of Structural Units for 2M2Y
  • Original NMR restraints for 2M2Y from PDB
  • Retrieve 2M2Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M2Y from S2C, [Save to disk]
    • View 2M2Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2M2Y
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M2Y, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m2y] [2m2y_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2M2Y
  • Community annotation for 2M2Y at PDBWiki (http://pdbwiki.org)

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