2M86 Solution structure of Hdm2 with engineered cyclotide date
authors Majumder, S., Ji, Y., Millard, M., Borra, R., Bi, T., Elnagar, A.Y., Neamati, N., Camarero, J.A.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceIn Vivo Activation of the p53 Tumor Suppressor Pathway by an Engineered Cyclotide., Ji Y, Majumder S, Millard M, Borra R, Bi T, Elnagar AY, Neamati N, Shekhtman A, Camarero JA, J Am Chem Soc. 2013 Jul 25. PMID:23848581
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (352 Kb) [Save to disk]
  • Biological Unit Coordinates (2m86.pdb1.gz) 36 Kb
  • CSU: Contacts of Structural Units for 2M86
  • Original NMR restraints for 2M86 from PDB
  • Retrieve 2M86 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M86 from S2C, [Save to disk]
  • View 2M86 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M86
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M86, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m86] [2m86_B] [2m86_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2M86: [PTI ] by SMART
  • Other resources with information on 2M86
  • Community annotation for 2M86 at PDBWiki (http://pdbwiki.org)

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