2ME6 NMR Structure of the homeodomain transcription factor Gbx1 from Homo sapiens in complex with the DNA sequence CGACTAATTAGTCG date
authors Proudfoot, A., Serrano, P., Geralt, M., Wuthrich, K., JCSG, Joint.Center.for.Structural.Genomics., STEMCELL, Partnership.for.Stem.Cell.Biology.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (143 Kb) [Save to disk]
  • Biological Unit Coordinates (2me6.pdb1.gz) 35 Kb
  • CSU: Contacts of Structural Units for 2ME6
  • Original NMR restraints for 2ME6 from PDB
  • Retrieve 2ME6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ME6 from S2C, [Save to disk]
  • View 2ME6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ME6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ME6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2me6_C] [2me6_B] [2me6_A] [2me6]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2ME6: [HOX ] by SMART
  • Other resources with information on 2ME6
  • Community annotation for 2ME6 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science