2MET NMR spatial structure of the trimeric mutant TM domain of VEGFR2 receptor. date
authors Mineev, K.S., Arseniev, A.A., Shulepko, M., Lyukmanova, E.N., Kirpichnikov, M.P.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceStructural and functional characterization of alternative transmembrane domain conformations in VEGF receptor 2 activation., Manni S, Mineev KS, Usmanova D, Lyukmanova EN, Shulepko MA, Kirpichnikov MP, Winter J, Matkovic M, Deupi X, Arseniev AS, Ballmer-Hofer K, Structure. 2014 Aug 5;22(8):1077-89. doi: 10.1016/j.str.2014.05.010. Epub 2014, Jun 26. PMID:24980797
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (303 Kb) [Save to disk]
  • Biological Unit Coordinates (2met.pdb1.gz) 31 Kb
  • CSU: Contacts of Structural Units for 2MET
  • Original NMR restraints for 2MET from PDB
  • Retrieve 2MET in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MET from S2C, [Save to disk]
  • View 2MET in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MET
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2MET, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2met] [2met_A] [2met_C] [2met_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2MET
  • Community annotation for 2MET at PDBWiki (http://pdbwiki.org)

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