2MF0 Structural basis of the non-coding RNA RsmZ acting as protein sponge: Conformer L of RsmZ(1-72)/RsmE(dimer) 1to3 complex date
authors Duss, O., Michel, E., Yulikov, M., Schubert, M., Jeschke, G., Allain, F.H.T.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene PFL
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceStructural basis of the non-coding RNA RsmZ acting as a protein sponge., Duss O, Michel E, Yulikov M, Schubert M, Jeschke G, Allain FH, Nature. 2014 May 29;509(7502):588-92. doi: 10.1038/nature13271. Epub 2014 May 14. PMID:24828038
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2625 Kb) [Save to disk]
  • Biological Unit Coordinates (2mf0.pdb1.gz) 133 Kb
  • CSU: Contacts of Structural Units for 2MF0
  • Original NMR restraints for 2MF0 from PDB
  • Retrieve 2MF0 in mmCIF format [Save to disk]
  • View 2MF0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MF0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2MF0, from MSDmotif at EBI
  • Fold representative 2mf0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mf0_B] [2mf0] [2mf0_G] [2mf0_E] [2mf0_D] [2mf0_C] [2mf0_A] [2mf0_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2MF0
  • Community annotation for 2MF0 at PDBWiki (http://pdbwiki.org)

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