2NCN Protein Transport date Apr 11, 2016
title Solution Structure Of The Autophagy-Related Protein Lc3c
authors C.Krichel, O.H.Weiergraeber, D.Willbold, P.Neudecker
compound source
Molecule: Autophagy-Related Protein Lc3c
Chain: A
Synonym: Autophagy-Related Protein Lc3 C, Autophagy-Related Ubiquitin-Like Modifier Lc3 C, Map1 Light Chain 3-Like Prot Map1amap1b Light Chain 3 C, Map1amap1b Lc3 C, Microtubule Associated Protein 1 Light Chain 3 Gamma;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Map1lc3c
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pgex-4t-2
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of the autophagy-related protein LC3C reveals a polyproline II motif on a mobile tether with phosphorylation site., Krichel C, Mockel C, Schillinger O, Huesgen PF, Sticht H, Strodel B, Weiergraber OH, Willbold D, Neudecker P, Sci Rep. 2019 Oct 2;9(1):14167. doi: 10.1038/s41598-019-48155-8. PMID:31578424
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (392 Kb) [Save to disk]
  • Biological Unit Coordinates (2ncn.pdb1.gz) 40 Kb
  • CSU: Contacts of Structural Units for 2NCN
  • Original NMR restraints for 2NCN from PDB
  • Retrieve 2NCN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NCN from S2C, [Save to disk]
    • View 2NCN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2NCN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ncn] [2ncn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2NCN
  • Community annotation for 2NCN at PDBWiki (http://pdbwiki.org)

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