2NSU Metal Transport date Nov 06, 2006
title Crystal Structure Of The Ectodomain Of Human Transferrin Receptor Fitted Into A Cryo-Em Reconstruction Of Canine Parvovirus And Feline Transferrin Receptor Complex
authors S.Hafenstein, V.A.Kostyuchenko, M.G.Rossmann
compound source
Molecule: Transferrin Receptor Protein 1
Chain: A, B
Fragment: The Ectodomain Of Human Transferrin Receptor
Synonym: Tfr1, Tr, Tfr, Trfr, Cd71 Antigen, T9, P90
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tfrc
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_organ: Ovary Cells
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcmvtfr
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 27.00 Å
Primary referenceAsymmetric binding of transferrin receptor to parvovirus capsids., Hafenstein S, Palermo LM, Kostyuchenko VA, Xiao C, Morais MC, Nelson CD, Bowman VD, Battisti AJ, Chipman PR, Parrish CR, Rossmann MG, Proc Natl Acad Sci U S A. 2007 Apr 17;104(16):6585-9. Epub 2007 Apr 9. PMID:17420467
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (207 Kb) [Save to disk]
  • Biological Unit Coordinates (2nsu.pdb1.gz) 202 Kb
  • CSU: Contacts of Structural Units for 2NSU
  • Likely Quarternary Molecular Structure file(s) for 2NSU
  • Retrieve 2NSU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NSU from S2C, [Save to disk]
  • View 2NSU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2NSU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2NSU, from MSDmotif at EBI
  • Fold representative 2nsu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2nsu] [2nsu_B] [2nsu_A]
  • SWISS-PROT database: [P02786]
  • Belongs to the transferrin receptor, cd71, (tfr) family according to TCDB.
  • Domain organization of [TFR1_HUMAN] by SWISSPFAM
  • Other resources with information on 2NSU
  • Community annotation for 2NSU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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