2NUC Hydrolase date Dec 06, 1997
title Staphlococcal Nuclease, Ethane Thiol Disulfide To V23c Varia
authors R.Wynn, P.C.Harkins, F.M.Richards, R.O.Fox
compound source
Molecule: Staphylococcal Nuclease
Chain: A
Ec: 3.1.31.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Staphylococcus Aureus
Organism_taxid: 1280
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Ar120
Expression_system_vector: Pas1
symmetry Space Group: P 41
R_factor 0.179 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.500 48.500 63.200 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CA, SCS, THP enzyme Hydrolase E.C.3.1.31.1 BRENDA
related structures by homologous chain: 1KDC, 1SND
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMobile unnatural amino acid side chains in the core of staphylococcal nuclease., Wynn R, Harkins PC, Richards FM, Fox RO, Protein Sci 1996 Jun;5(6):1026-31. PMID:8762134
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (2nuc.pdb1.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 2NUC
  • CSU: Contacts of Structural Units for 2NUC
  • Likely Quarternary Molecular Structure file(s) for 2NUC
  • Retrieve 2NUC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NUC from S2C, [Save to disk]
  • View 2NUC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2NUC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2NUC, from MSDmotif at EBI
  • Genome occurence of 2NUC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2nuc__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2nuc_A] [2nuc]
  • SWISS-PROT database: [P00644]
  • Domain organization of [NUC_STAAU] by SWISSPFAM
  • Domain found in 2NUC: [SNc ] by SMART
  • Other resources with information on 2NUC
  • Community annotation for 2NUC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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