2NUO Crystal structure of a complex of griffithsin with glucose date
authors Ziolkowska, N.E., Wlodawer, A.
compound source
symmetry
R_factor
R_Free 0.20347
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
ligand ACE, BGC, EDO, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystallographic studies of the complexes of antiviral protein griffithsin with glucose and N-acetylglucosamine., Ziolkowska NE, Shenoy SR, O'Keefe BR, Wlodawer A, Protein Sci. 2007 Jul;16(7):1485-9. Epub 2007 Jun 13. PMID:17567736
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (2nuo.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 2NUO
  • CSU: Contacts of Structural Units for 2NUO
  • Likely Quarternary Molecular Structure file(s) for 2NUO
  • Structure Factors (479 Kb)
  • Retrieve 2NUO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NUO from S2C, [Save to disk]
  • Re-refined 2nuo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2NUO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2NUO
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2NUO, from MSDmotif at EBI
  • Fold representative 2nuo from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2nuo] [2nuo_A] [2nuo_B]
  • SWISS-PROT database: [P84801]
  • Domain organization of [GRFIN_GRISQ] by SWISSPFAM
  • Domain found in 2NUO: [Jacalin ] by SMART
  • Other resources with information on 2NUO
  • Community annotation for 2NUO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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