2O6F	Structure of metal- free rTp34 from Treponema pallidum	date
authors	Machius, M., Brautigam, C.A., Deka, R.K., Tomchick, D.R., Lumpkins, S.B., Norgard, M.V.
compound		source
symmetry		R_factor R_Free 0.219
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.63
ligand	CL, EDO, SO4	enzyme
Primary reference	Crystal structure of the Tp34 (TP0971) lipoprotein of treponema pallidum: implications of its metal-bound state and affinity for human lactoferrin., Deka RK, Brautigam CA, Tomson FL, Lumpkins SB, Tomchick DR, Machius M, Norgard MV, J Biol Chem. 2007 Feb 23;282(8):5944-58. Epub 2006 Dec 27. PMID:17192261

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk] Biological Unit Coordinates (2o6f.pdb1.gz) 57 Kb LPC: Ligand-Protein Contacts for 2O6F CSU: Contacts of Structural Units for 2O6F Likely Quarternary Molecular Structure file(s) for 2O6F Structure Factors (614 Kb) Retrieve 2O6F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2O6F from S2C, [Save to disk] Re-refined 2o6f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2O6F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2O6F

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 2O6F, from MSDmotif at EBI Fold representative 2o6f from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2o6f_B] [2o6f_A] [2o6f] SWISS-PROT database: [P19478] Domain organization of [TA34_TREPA] by SWISSPFAM

Other resources with information on 2O6F

Community annotation for 2O6F at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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