2OAT	Aminotransferase	date	May 07, 1998
title	Ornithine Aminotransferase Complexed With 5-Fluoromethylorni
authors	P.Storici, T.Schirmer
compound		source
Molecule: Ornithine Aminotransferase Chain: A, B, C Ec: 2.6.1.13 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Liver Organelle: Mitochondria Cellular_location: Intramitochondria Gene: Oat Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Tb1 Expression_system_plasmid: Pmal-C2
symmetry	Space Group: P 32 2 1	R_factor 0.204 R_Free 0.232
crystal cell	length a length b length c angle alpha angle beta angle gamma 115.280 115.280 186.810 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.95 Å
ligand	PFM	enzyme	Transferase E.C.2.6.1.13 BRENDA
related structures	by homologous chain: 1GBN
Gene Ontology	Chain Function Process Component A, C, B
Primary reference	Crystal structure of human ornithine aminotransferase complexed with the highly specific and potent inhibitor 5-fluoromethylornithine., Storici P, Capitani G, Muller R, Schirmer T, Jansonius JN, J Mol Biol 1999 Jan 8;285(1):297-309. PMID:9878407

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (206 Kb) [Save to disk] Biological Unit Coordinates (2oat.pdb1.gz) 266 Kb Biological Unit Coordinates (2oat.pdb2.gz) 135 Kb Biological Unit Coordinates (2oat.pdb3.gz) 135 Kb LPC: Ligand-Protein Contacts for 2OAT CSU: Contacts of Structural Units for 2OAT Likely Quarternary Molecular Structure file(s) for 2OAT Retrieve 2OAT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OAT from S2C, [Save to disk]

View 2OAT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OAT

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OAT, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d2oata_, region A [Jmol] [rasmolscript] [script source]     - Domain d2oatb_, region B [Jmol] [rasmolscript] [script source]     - Domain d2oatc_, region C [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2oat_B] [2oat] [2oat_A] [2oat_C] SWISS-PROT database: [P04181] Domain organization of [OAT_HUMAN] by SWISSPFAM

Other resources with information on 2OAT

Community annotation for 2OAT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---