2OBD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1PE, 2OB, CL, EPE, FUC, NAG, NDG, PCW, PG4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • phospholipid transporter act...
  • intermembrane cholesterol tr...
  • regulation of cholesterol ef...
  • high-density lipoprotein par...

  • Primary referenceCrystal structure of cholesteryl ester transfer protein reveals a long tunnel and four bound lipid molecules., Qiu X, Mistry A, Ammirati MJ, Chrunyk BA, Clark RW, Cong Y, Culp JS, Danley DE, Freeman TB, Geoghegan KF, Griffor MC, Hawrylik SJ, Hayward CM, Hensley P, Hoth LR, Karam GA, Lira ME, Lloyd DB, McGrath KM, Stutzman-Engwall KJ, Subashi AK, Subashi TA, Thompson JF, Wang IK, Zhao H, Seddon AP, Nat Struct Mol Biol. 2007 Jan 21;. PMID:17237796
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (2obd.pdb1.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 2OBD
  • CSU: Contacts of Structural Units for 2OBD
  • Likely Quarternary Molecular Structure file(s) for 2OBD
  • Structure Factors (715 Kb)
  • Retrieve 2OBD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OBD from S2C, [Save to disk]
  • Re-refined 2obd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OBD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2obd] [2obd_A]
  • SWISS-PROT database: [P11597]
  • Belongs to the bactericidal permeability increasing protein (bpip) family according to TCDB.
  • Domains found in 2OBD: [BPI1] [BPI2 ] by SMART

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