2OCZ	Lyase	date	Dec 21, 2006
title	The Structure Of A Putative 3-Dehydroquinate Dehydratase Fro Streptococcus Pyogenes.
authors	M.E.Cuff, E.Duggan, S.Clancy, A.Joachimiak, Midwest Center For S Genomics (Mcsg)
compound		source
Molecule: 3-Dehydroquinate Dehydratase Chain: A Synonym: 3-Dehydroquinase, Type I Dhqase Ec: 4.2.1.10 Engineered: Yes		Organism_scientific: Streptococcus Pyogenes Serotype M1 Organism_taxid: 301447 Strain: M1 Gas Gene: Arod Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmcsg19
symmetry	Space Group: P 43 21 2	R_factor 0.175 R_Free 0.230
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.688 81.688 85.364 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.85 Å
ligand	EDO, MG, MSE	enzyme	Lyase E.C.4.2.1.10 BRENDA
note	2OCZ is a representative structure
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk] Biological Unit Coordinates (2ocz.pdb1.gz) 84 Kb LPC: Ligand-Protein Contacts for 2OCZ CSU: Contacts of Structural Units for 2OCZ Likely Quarternary Molecular Structure file(s) for 2OCZ Structure Factors (179 Kb) Retrieve 2OCZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OCZ from S2C, [Save to disk] Re-refined 2ocz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OCZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OCZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OCZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ocz_A] [2ocz] SWISS-PROT database: [P63590] Domain organization of [AROD_STRP1] by SWISSPFAM

Other resources with information on 2OCZ

Community annotation for 2OCZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---