2ODY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NA, NAG, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


D, B


E, F
  • serine-type endopeptidase in...


  • Primary referenceIsolation, cloning and structural characterisation of boophilin, a multifunctional kunitz-type proteinase inhibitor from the cattle tick., Macedo-Ribeiro S, Almeida C, Calisto BM, Friedrich T, Mentele R, Sturzebecher J, Fuentes-Prior P, Pereira PJ, PLoS ONE. 2008 Feb 20;3(2):e1624. PMID:18286181
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (2ody.pdb1.gz) 73 Kb
  • Biological Unit Coordinates (2ody.pdb2.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 2ODY
  • CSU: Contacts of Structural Units for 2ODY
  • Likely Quarternary Molecular Structure file(s) for 2ODY
  • Structure Factors (784 Kb)
  • Retrieve 2ODY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ODY from S2C, [Save to disk]
  • Re-refined 2ody structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ODY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ody] [2ody_A] [2ody_B] [2ody_C] [2ody_D] [2ody_E] [2ody_F]
  • SWISS-PROT database: [Q8WPI2] [P00735]
  • Domains found in 2ODY: [KU] [Tryp_SPc ] by SMART

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