2OF7 Transcription date Jan 02, 2007
title Structural Genomics, The Crystal Structure Of A Tetr-Family Transcriptional Regulator From Streptomyces Coelicolor A3
authors K.Tan, X.Xu, H.Zheng, A.Savchenko, A.Edwards, A.Joachimiak, Midwes For Structural Genomics (Mcsg)
compound source
Molecule: Putative Tetr-Family Transcriptional Regulator
Chain: A
Engineered: Yes
 Organism_scientific: Streptomyces Coelicolor
Organism_taxid: 1902
Strain: A3
Gene: Sco4977
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P15tv
symmetry Space Group: C 1 2 1
R_factor 0.231 R_Free 0.293
crystal
cell
length a length b length c angle alpha angle beta angle gamma
75.101 73.240 48.082 90.00 107.27 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (2of7.pdb1.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 2OF7
  • CSU: Contacts of Structural Units for 2OF7
  • Likely Quarternary Molecular Structure file(s) for 2OF7
  • Structure Factors (165 Kb)
  • Retrieve 2OF7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OF7 from S2C, [Save to disk]
  • Re-refined 2of7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2OF7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2OF7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2OF7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2of7] [2of7_A]
  • SWISS-PROT database: [Q9EWH2]
  • Domain organization of [Q9EWH2_STRCO] by SWISSPFAM
    • Other resources with information on 2OF7
  • Community annotation for 2OF7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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