2OGR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CH7, NFA enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, A, C, B


Primary reference[Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp. at the resolution 1.8 angstrom], Pletneva NV, Pletnev SV, Chudakov DM, Tikhonova TV, Popov VO, Martynov VI, Wlodawer A, Dauter Z, Pletnev VZ, Bioorg Khim. 2007 Jul-Aug;33(4):421-30. PMID:17886433
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (155 Kb) [Save to disk]
  • Biological Unit Coordinates (2ogr.pdb1.gz) 150 Kb
  • LPC: Ligand-Protein Contacts for 2OGR
  • CSU: Contacts of Structural Units for 2OGR
  • Likely Quarternary Molecular Structure file(s) for 2OGR
  • Structure Factors (738 Kb)
  • Retrieve 2OGR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OGR from S2C, [Save to disk]
  • Re-refined 2ogr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OGR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ogr] [2ogr_A] [2ogr_B] [2ogr_C] [2ogr_D]
  • SWISS-PROT database: [Q9U6Y4]

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