OCA Atlas for 2OGZ

2OGZ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

U1N BindingDB

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, A	virus receptor activity chemorepellent activity

Primary reference

Discovery of non-covalent dipeptidyl peptidase IV inhibitors which induce a conformational change in the active site., Sheehan SM, Mest HJ, Watson BM, Klimkowski VJ, Timm DE, Cauvin A, Parsons SH, Shi Q, Canada EJ, Wiley MR, Ruehter G, Evers B, Petersen S, Blaszczak LC, Pulley SR, Margolis BJ, Wishart GN, Renson B, Hankotius D, Mohr M, Zechel JC, Michael Kalbfleisch J, Dingess-Hammond EA, Boelke A, Weichert AG, Bioorg Med Chem Lett. 2007 Mar 15;17(6):1765-8. Epub 2006 Dec 24. PMID:17239592

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (251 Kb) [Save to disk]

Biological Unit Coordinates (2ogz.pdb1.gz) 246 Kb

LPC: Ligand-Protein Contacts for 2OGZ

CSU: Contacts of Structural Units for 2OGZ

Likely Quarternary Molecular Structure file(s) for 2OGZ

Structure Factors (691 Kb)

Retrieve 2OGZ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2OGZ from S2C, [Save to disk]

Re-refined 2ogz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OGZ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ogz] [2ogz_A] [2ogz_B]

SWISS-PROT database: [P27487]

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