2OI4	Transferase	date	Jan 10, 2007
title	Crystal Structure Of Human Pim1 In Complex With Fluorinated Pyridocarbazole
authors	J.Maksimoska, E.Meggers
compound		source
Molecule: Proto-Oncogene Serinethreonine-Protein Kinase Pi Chain: X Ec: 2.7.11.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pim1 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Plic-Sgc1
symmetry	Space Group: P 65	R_factor 0.189 R_Free 0.244
crystal cell	length a length b length c angle alpha angle beta angle gamma 98.104 98.104 80.672 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	CL, EDO, EPE, JM1	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component X
Primary reference	Ruthenium half-sandwich complexes as protein kinase inhibitors: derivatization of the pyridocarbazole pharmacophore ligand., Pagano N, Maksimoska J, Bregman H, Williams DS, Webster RD, Xue F, Meggers E, Org Biomol Chem. 2007 Apr 21;5(8):1218-27. Epub 2007 Mar 20. PMID:17406720

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk] Biological Unit Coordinates (2oi4.pdb1.gz) 50 Kb LPC: Ligand-Protein Contacts for 2OI4 CSU: Contacts of Structural Units for 2OI4 Likely Quarternary Molecular Structure file(s) for 2OI4 Structure Factors (331 Kb) Retrieve 2OI4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OI4 from S2C, [Save to disk] Re-refined 2oi4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OI4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OI4

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OI4, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2oi4] [2oi4_X] SWISS-PROT database: [P11309] Domain organization of [PIM1_HUMAN] by SWISSPFAM Domain found in 2OI4: [S_TKc ] by SMART

Other resources with information on 2OI4

Community annotation for 2OI4 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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