2OK1	Transferase	date	Jan 15, 2007
title	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-Chloroph Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
authors	X.Xie, M.D.Jacobs
compound		source
Molecule: Mitogen-Activated Protein Kinase 10 Chain: A Synonym: Stress-Activated Protein Kinase Jnk3, C-Jun N-Term Kinase 3, Map Kinase P49 3f12; Ec: 2.7.11.24 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mapk10, Jnk3, Jnk3a, Prkm10 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 De3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-15b
symmetry	Space Group: P 21 21 21	R_factor 0.241 R_Free 0.294
crystal cell	length a length b length c angle alpha angle beta angle gamma 52.255 70.334 107.488 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	33A BindingDB	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Flipped Out: Structure-Guided Design of Selective Pyrazolylpyrrole ERK Inhibitors., Aronov AM, Baker C, Bemis GW, Cao J, Chen G, Ford PJ, Germann UA, Green J, Hale MR, Jacobs M, Janetka JW, Maltais F, Martinez-Botella G, Namchuk MN, Straub J, Tang Q, Xie X, J Med Chem. 2007 Mar 22;50(6):1280-7. Epub 2007 Feb 15. PMID:17300186

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk] Biological Unit Coordinates (2ok1.pdb1.gz) 57 Kb LPC: Ligand-Protein Contacts for 2OK1 CSU: Contacts of Structural Units for 2OK1 Likely Quarternary Molecular Structure file(s) for 2OK1 Structure Factors (142 Kb) Retrieve 2OK1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OK1 from S2C, [Save to disk] Re-refined 2ok1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OK1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OK1

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OK1, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ok1_A] [2ok1] SWISS-PROT database: [P53779] Domain organization of [MK10_HUMAN] by SWISSPFAM Domain found in 2OK1: [S_TKc ] by SMART

Other resources with information on 2OK1

Community annotation for 2OK1 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---