2ON6 Crystal structure of human purine nucleoside phosphorylase mutant H257F with Imm-H date
authors Rinaldo-Matthis, A., Murkin, A.S., Almo, S.C., Schramm, V.L.
compound source
symmetry
R_factor
R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand IMH BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNeighboring Group Participation in the Transition State of Human Purine Nucleoside Phosphorylase., Murkin AS, Birck MR, Rinaldo-Matthis A, Shi W, Taylor EA Steven C Almo, Schramm VL, Biochemistry. 2007 May 1;46(17):5038-5049. Epub 2007 Apr 4. PMID:17407325
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (2on6.pdb1.gz) 137 Kb
  • LPC: Ligand-Protein Contacts for 2ON6
  • CSU: Contacts of Structural Units for 2ON6
  • Likely Quarternary Molecular Structure file(s) for 2ON6
  • Structure Factors (185 Kb)
  • Retrieve 2ON6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ON6 from S2C, [Save to disk]
  • Re-refined 2on6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ON6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ON6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ON6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2on6_A] [2on6]
  • SWISS-PROT database: [P00491]
  • Domain organization of [PNPH_HUMAN] by SWISSPFAM
  • Other resources with information on 2ON6
  • Community annotation for 2ON6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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