OCA Atlas for 2ONC

2ONC

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

NAG, SY1 BindingDB

enzyme

Gene
Ontology

Chain	Function	Process	Component
A, C, B, D	virus receptor activity chemorepellent activity

Primary reference

Discovery of alogliptin: a potent, selective, bioavailable, and efficacious inhibitor of dipeptidyl peptidase IV., Feng J, Zhang Z, Wallace MB, Stafford JA, Kaldor SW, Kassel DB, Navre M, Shi L, Skene RJ, Asakawa T, Takeuchi K, Xu R, Webb DR, Gwaltney SL 2nd, J Med Chem. 2007 May 17;50(10):2297-300. Epub 2007 Apr 19. PMID:17441705

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (499 Kb) [Save to disk]

Biological Unit Coordinates (2onc.pdb1.gz) 251 Kb

Biological Unit Coordinates (2onc.pdb2.gz) 246 Kb

Biological Unit Coordinates (2onc.pdb3.gz) 245 Kb

LPC: Ligand-Protein Contacts for 2ONC

CSU: Contacts of Structural Units for 2ONC

Likely Quarternary Molecular Structure file(s) for 2ONC

Structure Factors (973 Kb)

Retrieve 2ONC in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2ONC from S2C, [Save to disk]

Re-refined 2onc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2ONC in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2onc] [2onc_A] [2onc_B] [2onc_C] [2onc_D]

SWISS-PROT database: [P27487]

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