2OOH	Isomerase	date	Jan 25, 2007
title	Crystal Structure Of Mif Bound To A Novel Inhibitor, Oxim-11
authors	G.V.Crichlow, Y.Al-Abed, E.Lolis
compound		source
Molecule: Macrophage Migration Inhibitory Factor Chain: A, B, C Synonym: Mif, Phenylpyruvate Tautomerase, Glycosylation-Inh Factor, Gif, (Ec 5.3.2.1); Ec: 5.3.2.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mif Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11b
symmetry	Space Group: P 31 2 1	R_factor 0.191 R_Free 0.218
crystal cell	length a length b length c angle alpha angle beta angle gamma 95.595 95.595 103.092 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.85 Å
ligand	GOL, OX3, SO4	enzyme	Isomerase E.C.5.3.2.1 BRENDA
Gene Ontology	Chain Function Process Component A, C, B chemoattractant activity
Primary reference	Alternative chemical modifications reverse the binding orientation of a pharmacophore scaffold in the active site of MIF., Crichlow GV, Cheng KF, Dabideen D, Ochani M, Aljabari B, Pavlov VA, Miller EJ, Lolis E, Al-Abed Y, J Biol Chem. 2007 May 25;. PMID:17526494

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk] Biological Unit Coordinates (2ooh.pdb1.gz) 59 Kb LPC: Ligand-Protein Contacts for 2OOH CSU: Contacts of Structural Units for 2OOH Likely Quarternary Molecular Structure file(s) for 2OOH Structure Factors (630 Kb) Retrieve 2OOH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OOH from S2C, [Save to disk] Re-refined 2ooh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OOH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OOH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OOH, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ooh] [2ooh_C] [2ooh_A] [2ooh_B] SWISS-PROT database: [P14174] Domain organization of [MIF_HUMAN] by SWISSPFAM

Other resources with information on 2OOH

Community annotation for 2OOH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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